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Add the option to redirect the new consensus to the standard output by <code>-F -</code>

feature request

Status: Open.

#39 In karel-brinda/ococo;

· karel-brinda opened on Feb 17, 2023

use in hybrid assembly

Status: Open.

#37 In karel-brinda/ococo;

· phiweger opened on May 17, 2019

Add an analogy of samtools depth

Status: Open.

#36 In karel-brinda/ococo;

· karel-brinda opened on Jan 16, 2019

VCF with both SNV and non SNV's

Status: Open.

#32 In karel-brinda/ococo;

· Takadonet opened on Dec 15, 2017

Include deletion events in VCF

feature request

Status: Open.

#31 In karel-brinda/ococo;

· Takadonet opened on Dec 14, 2017

Test all combinations of parameters

enhancement

Status: Open.

#27 In karel-brinda/ococo;

· karel-brinda opened on Dec 7, 2017

Filtration by flags

feature request

Status: Open.

#22 In karel-brinda/ococo;

· karel-brinda opened on Oct 24, 2016

Segmentation fault when read exceeds reference boundaries

bug

Status: Open.

#20 In karel-brinda/ococo;

· karel-brinda opened on Aug 29, 2016

Flag for exact coverage

feature request

Status: Open.

#15 In karel-brinda/ococo;

· karel-brinda opened on Jul 11, 2016