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Check required inputs in samplesheet before proceeding

enhancementNew feature or requestNew feature or request

Status: Open.

#26 In mskilab-org/nf-gos;

· stanleyrc opened on Aug 15, 2025

isEmpty error on empty msisensorpro file channel for GRCh38

bugSomething isn't workingSomething isn't working

Status: Open.

#24 In mskilab-org/nf-gos;

· andrewrlynch opened on Jun 17, 2025

AWS s3 access denied

Status: Open.

#22 In mskilab-org/nf-gos;

· shihabdider opened on Mar 19, 2025

Whitelist Heme Driver Junctions

enhancementNew feature or requestNew feature or request

Status: Open.

#20 In mskilab-org/nf-gos;

· kevinmhadi opened on Mar 11, 2025

dev catchup

Status: Open.

#18 In mskilab-org/nf-gos;

· jrafailov opened on Mar 10, 2025

onenesstwoness support in nf-gos

enhancementNew feature or requestNew feature or request

Status: Open.

#17 In mskilab-org/nf-gos;

· jrafailov opened on Mar 10, 2025

Multiplicity support in nf-gOS

enhancementNew feature or requestNew feature or request

Status: Open.

#16 In mskilab-org/nf-gos;

· jrafailov opened on Mar 10, 2025

Junction filter fails on memory limit but does not try to resubmit with increased memory

bugSomething isn't workingSomething isn't working

Status: Open.

#13 In mskilab-org/nf-gos;

· stanleyrc opened on Mar 9, 2025

Missing merged bam results from top level directory

Status: Open.

#10 In mskilab-org/nf-gos;

· kevinmhadi opened on Feb 13, 2025

Implement multiQC into the workflow

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#9 In mskilab-org/nf-gos;

· shihabdider opened on Feb 4, 2025

Change the pipeline samplesheet header to match Skilift's Cohort schema

Status: Open.

Feature

#7 In mskilab-org/nf-gos;

· shihabdider opened on Feb 3, 2025