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bug fix: chain comparison not plotting properly #106

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bug fix: chain comparison not plotting properly #106

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bd49e27
fix typo in chain compare
Mar 23, 2025
37179aa
Merge branch 'nanograv:main' into bug-fix/jgb-fix-noise-comp
jeremy-baier Sep 5, 2025
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6 changes: 3 additions & 3 deletions src/pint_pal/noise_utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -176,9 +176,9 @@ def analyze_noise(

# load in same for comparison noise model
if chaindir_compare is not None:
compare_core = co.Core(chaindir=chaindir)
compare_core.set_burn(noise_core.burn)
chain_compare = compare_core.chain[int(burn_frac * len(noise_core.chain)) :, :-4]
compare_core = co.Core(chaindir=chaindir_compare)
compare_core.set_burn(compare_core.burn)
chain_compare = compare_core.chain[int(burn_frac * len(compare_core.chain)) :, :-4]
pars_compare = np.array([p for p in compare_core.params if p not in ['lnlike', 'lnpost', 'chain_accept', 'pt_chain_accept']])
# if len(pars_compare)+2 != chain_compare.shape[1]:
# chain_compare = chain_compare[:, :len(pars_compare)+2]
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