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Our GFF files are not strictly compliant currently: in presence of input sequences with duplicated seqids, the output GFF files will also have duplicated #sequence-region pragmas, which is not allowed according to the GFF3 spec, and fails validation.

Our GFF files are not strictly compliant currently: in presence of input sequences with duplicated seqids, the output GFF files will also have duplicated #sequence-region pragmas, which is not allowed according to the GFF3 spec, and fails validation.
@ivan-aksamentov ivan-aksamentov force-pushed the chore/ci-disabl-hav-output-gff-validation branch from 835ce49 to 1784c34 Compare December 3, 2025 07:15
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github-actions bot commented Dec 3, 2025

@ivan-aksamentov ivan-aksamentov merged commit 6ee2a09 into master Dec 3, 2025
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@ivan-aksamentov ivan-aksamentov deleted the chore/ci-disabl-hav-output-gff-validation branch December 3, 2025 08:04
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2 participants