make it run for ibis

[suzannejin]

• add test profile for ibis data
• add dev profile for development related stuff (eg. development container)
• modify channel combinations to properly handle the output from preprocessing and run through stimulus
• fix problem with not caching check_model module
• modify tune to output optuna artifacts

PR checklist

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the pipeline conventions in the contribution docs
• If necessary, also make a PR on the nf-core/deepmodeloptim branch on the nf-core/test-datasets repository.
• Make sure your code lints (nf-core pipelines lint).
• Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
• Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
• Usage Documentation in docs/usage.md is updated.
• Output Documentation in docs/output.md is updated.
• CHANGELOG.md is updated.
• README.md is updated (including new tool citations and authors/contributors).

[luisas]

LGTM!

Thanks for fixing the merging conflicts :)

[luisas]

The test data is a small subset of ibis right? or is it the full dataset?

[suzannejin]

yes it only has one TF
anyway the heavy part which is the tuning - i set max_sample to be very small, so it basically just runs for a bit and stops - to be fast