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Allow relative sample size input in subsampling #149

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Allow relative sample size input in subsampling #149

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2 changes: 1 addition & 1 deletion docs/usage.md
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Expand Up @@ -92,7 +92,7 @@ genome: 'GRCh37'

You can also generate such `YAML`/`JSON` files via [nf-core/launch](https://nf-co.re/launch).

Optionally, the `sample_size` parameter allows you to subset a random number of reads to be analysed. Note that it refers to an absolute number.
Optionally, the `sample_size` parameter allows you to subset a random number of reads to be analysed. Both absolute numbers (e.g 10000) and relative numbers (e.g 0.25) can be specified.

```bash
nextflow run nf-core/seqinspector --input ./samplesheet.csv --outdir ./results --sample_size 1000000 -profile docker
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4 changes: 2 additions & 2 deletions nextflow_schema.json
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Expand Up @@ -24,9 +24,9 @@
"fa_icon": "fas fa-file-csv"
},
"sample_size": {
"type": "integer",
"type": "number",
"description": "Take this number of reads as a subset.",
"help_text": "Choose the size of the subset or 0, if no subsampling shall be performed. Note that it refers to an absolute number.",
"help_text": "Choose the size of the subset or 0, if no subsampling shall be performed. Both absolute numbers (e.g 10000) and relative numbers (e.g 0.25) can be specified.",
"default": 0
},
"outdir": {
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