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nipype / pydra Public

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Develop: fixes for test_environments#769

Merged

tclose merged 39 commits intodevelopnipype/pydra:developfrom

test_environmentsnipype/pydra:test_environmentsCopy head branch name to clipboard

Feb 25, 2025

Conversation Commits39 (39)Checks Files changed

Merged

Develop: fixes for test_environments#769
tclose merged 39 commits intodevelopfrom
test_environments

Commits

Commits on Feb 24, 2025

added comment
tclose
committed
starting to convert test_environments tests to new syntax
tclose
committed
debugging test_environments
tclose
committed
debugged test_environments (except singularity tests)
tclose
committed
updated singularity tests
tclose
committed
updated __version__ location to inside pydra.engine
tclose
committed
updated github actions version tests
tclose
committed
dropped --pyargs flag in CI test as it doesn't work with namespace packages
tclose
committed
streamlined test matrices
tclose
committed
reverted ubuntu version to 22.04 for singularity tests
tclose
committed
added test_environments to singularity test
tclose
committed
fixed up singularity tests
tclose
committed
started implementing singularity tests
tclose
committed
reworked test_singularity for new syntax
tclose
committed
fixes to test_singularity tests
tclose
committed
removed mandatory kwarg in test_singularity shell.defines
tclose
committed
changed shell.arg to shell.outarg for path_template outputs
tclose
committed
cleaning up more test_environment singularity tests
tclose
committed
cleaned up singularity unittests
tclose
committed
debugging singularity tests
tclose
committed
fixed overzealous validation of path_template
tclose
committed
made all args to task call kwds
tclose
committed
working on singularity errors
tclose
committed
more debugging of singularity
tclose
committed
more debugging
tclose
committed
attempting to fix singularity tests
tclose
committed
fixed up environments import
tclose
committed
shell.define can take a list of tokens as well as a single string
tclose
committed
debugging docker unittests
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committed
test_dockertask tests pass
tclose
committed
fixed initialisation of environment in Submitter
tclose
committed
debugged test_dockertask
tclose
committed

Commits on Feb 25, 2025

fixed merge error
tclose
committed
fixed merging error in test_shell
tclose
committed
debugging unittests
tclose
committed
debugged singularity tests
tclose
committed
made imports in pydra.design.* modules absolute
tclose
committed
added fileformats-extras to test deps
tclose
committed
fetch tags in github actions so installed version is correct
tclose
committed

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