Draft pull - with refactor & creating readable yaml of basestation attributes

.vscode/settings.json

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+{
+    "python.testing.pytestArgs": [
+        "tests"
+    ],
+    "python.testing.unittestEnabled": false,
+    "python.testing.pytestEnabled": true
+}

data/info_p0040001_20031002.yaml

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+basestn_attr:
+  basestn_project:
+    instrument: 'wlbb2f sbe41 '
+    project: Labrador Sea, October 2003
+    summary: Multiple transects of Labrador Sea upper-ocean structure from Davis Strait
+      to the WOCE AR7W repeat line.
+    title: Physical data collected from Seaglider SG004 during Labrador Sea, October
+      2003 in the Labrador Sea deployed on 2003-10-02
+  basestn_software:
+    Conventions: CF-1.6
+    Metadata_Conventions: Unidata Dataset Discovery v1.0
+    base_station_micro_version: '3705'
+    base_station_version: '2.8'
+    cdm_data_type: Trajectory
+    featureType: trajectory
+    file_version: '2.71'
+    nodc_template_version: NODC_NetCDF_Trajectory_Template_v0.9
+    processing_level: '1.100000'
+    quality_control_version: '1.1'
+    seaglider_software_version: '66.05'
+    standard_name_vocabulary: CF-1.6
+  basestn_timing:
+    date_created: '2013-08-01T03:08:59Z'
+    date_modified: '2013-08-01T03:08:59Z'
+    start_time: '1065096805.0'
+    time_coverage_start: '2003-10-02T12:10:43Z'
+    uuid: 2e121087-fa5c-11e2-b00e-0026bb609360
+  basestn_vehicle:
+    glider: '4'
+    id: p0040001_20031002
+    mission: '1'
+    platform: glider
+    platform_id: SG004
+    source: Seaglider SG004
+  creator:
+    contributor_name: Peter Rhines
+    contributor_role: Co-principal investigator
+    creator_email: [email protected]
+    creator_name: Charlie Eriksen
+    creator_url: http://iop.apl.washington.edu/seaglider/index.php?glider=*&base=*&status=*&mission=LabSea&logic=and
+    institution: 'School of Oceanography
+
+      University of Washington
+
+      Seattle, WA 98195-5351'
+    naming_authority: edu.washington.apl
+basestn_sensors:
+  ALTIMETER:
+    sensor_name: ALTIMETER
+    sensor_presence: false
+  CTD:
+    sensor_attributes:
+      sbe41: '{''long_name'': ''underway thermosalinograph'', ''ancillary_variables'':
+        '' sg_cal_t_g sg_cal_t_h sg_cal_t_i sg_cal_t_jsg_cal_c_g sg_cal_c_h sg_cal_c_i
+        sg_cal_c_j sg_cal_cpcor sg_cal_ctcor'', ''make_model'': ''unpumped Seabird
+        SBE41'', ''nodc_name'': ''thermosalinograph''}'
+    sensor_calcomm: SBE#29613t1/c1 calibration 7 Sep 02
+    sensor_name: CTD
+    sensor_presence: true
+    sensor_singletons:
+      sg_cal_c_g: -10.1992571
+      sg_cal_c_h: 1.17778563
+      sg_cal_c_i: -0.00462991508
+      sg_cal_c_j: 0.000252665058
+      sg_cal_t_g: 0.00434220308
+      sg_cal_t_h: 0.000638864913
+      sg_cal_t_i: 2.60086783e-05
+      sg_cal_t_j: 2.89737417e-06
+    sensor_variables:
+      eng_sbect_condFreq: DataArray(sg_data_point)
+      eng_sbect_tempFreq: DataArray(sg_data_point)
+  DISSOLVED_GAS:
+    sensor_attributes:
+      sg_cal_calibcomm_oxygen: '{}'
+    sensor_calcomm: SBE 43F s/n 25281-1 calibration 12 Aug 01
+    sensor_name: DISSOLVED_GAS
+    sensor_presence: true
+    sensor_singletons:
+      sg_cal_Boc: 0.005506
+      sg_cal_Foffset: -1390.0
+      sg_cal_Pcor: 0.000135
+      sg_cal_Soc: 0.0001599
+      sg_cal_Tcor: 0.001
+    sensor_variables: {}
+  FLUOROMETER:
+    sensor_attributes:
+      wlbb2f: '{''long_name'': ''underway backscatter fluorescence puck'', ''make_model'':
+        ''Wetlabs backscatter fluorescence puck''}'
+    sensor_calcomm: Unknown
+    sensor_name: FLUOROMETER
+    sensor_presence: true
+    sensor_singletons: {}
+    sensor_variables:
+      eng_wlbb2f_VFtemp: DataArray(sg_data_point)
+      eng_wlbb2f_blueCount: DataArray(sg_data_point)
+      eng_wlbb2f_blueRef: DataArray(sg_data_point)
+      eng_wlbb2f_fluorCount: DataArray(sg_data_point)
+      eng_wlbb2f_redCount: DataArray(sg_data_point)
+      eng_wlbb2f_redRef: DataArray(sg_data_point)
+  MAGNETOMETER:
+    sensor_attributes: {}
+    sensor_calcomm: Unknown
+    sensor_name: MAGNETOMETER
+    sensor_presence: false
+    sensor_singletons:
+      magnetic_variation: -34.6
+    sensor_variables: {}
+  RAFOS:
+    sensor_name: RAFOS
+    sensor_presence: false

data/info_p0050001_20080606.yaml

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+basestn_attr:
+  basestn_project:
+    instrument: 'wlbb2f sbe41 sbe43 '
+    project: 'Iceland Scotland Ridge June 2008 '
+    summary: Multiple transects of Faroe-Iceland Ridge upper-ocean structure
+    title: Physical data collected from Seaglider SG005 during Iceland Scotland Ridge
+      June 2008  in the North Atlantic Ocean deployed on 2008-06-06
+  basestn_software:
+    Conventions: CF-1.6
+    Metadata_Conventions: Unidata Dataset Discovery v1.0
+    base_station_micro_version: '3897'
+    base_station_version: '2.8'
+    cdm_data_type: Trajectory
+    featureType: trajectory
+    file_version: '2.71'
+    nodc_template_version: NODC_NetCDF_Trajectory_Template_v0.9
+    processing_level: '1.100000'
+    quality_control_version: '1.1'
+    seaglider_software_version: '66.03'
+    standard_name_vocabulary: CF-1.6
+  basestn_timing:
+    date_created: '2014-03-11T20:03:32Z'
+    date_issued: '2014-03-11T20:03:32Z'
+    date_modified: '2014-03-11T20:03:32Z'
+    start_time: '1212775658.0'
+    time_coverage_start: '2008-06-06T18:06:18Z'
+    uuid: 9e33a22e-a959-11e3-b35f-0026bb609360
+  basestn_vehicle:
+    glider: '5'
+    id: p0050001_20080606
+    mission: '1'
+    platform: glider
+    platform_id: SG005
+    source: Seaglider SG005
+  creator:
+    contributor_name: Peter Rhines
+    contributor_role: Principal investigator
+    creator_email: [email protected]
+    creator_name: Charlie Eriksen
+    creator_url: http://iop.apl.washington.edu/seaglider/index.php?glider=*&base=*&status=*&mission=Faroes&logic=and
+    institution: 'School of Oceanography
+
+      University of Washington
+
+      Seattle, WA 98195-5351'
+    naming_authority: edu.washington.apl
+basestn_sensors:
+  ALTIMETER:
+    sensor_attributes:
+      log_ALTIM_TOP_PING: '{}'
+    sensor_calcomm: Unknown
+    sensor_name: ALTIMETER
+    sensor_presence: true
+    sensor_singletons:
+      log_ALTIM_BOTTOM_PING_RANGE: 0.0
+      log_ALTIM_BOTTOM_TURN_MARGIN: 10.0
+      log_ALTIM_FREQUENCY: 13.0
+      log_ALTIM_PING_DELTA: 25.0
+      log_ALTIM_PING_DEPTH: 150.0
+      log_ALTIM_PULSE: 3.0
+      log_ALTIM_SENSITIVITY: 3.0
+      log_ALTIM_TOP_MIN_OBSTACLE: 1.0
+      log_ALTIM_TOP_PING_RANGE: 20.0
+      log_ALTIM_TOP_TURN_MARGIN: 0.0
+    sensor_variables: {}
+  CTD:
+    sensor_attributes:
+      sbe41: '{''long_name'': ''underway thermosalinograph'', ''ancillary_variables'':
+        '' sg_cal_t_g sg_cal_t_h sg_cal_t_i sg_cal_t_jsg_cal_c_g sg_cal_c_h sg_cal_c_i
+        sg_cal_c_j sg_cal_cpcor sg_cal_ctcor'', ''make_model'': ''unpumped Seabird
+        SBE41'', ''nodc_name'': ''thermosalinograph''}'
+    sensor_calcomm: SBE 24520-1 calibration 04FEB08
+    sensor_name: CTD
+    sensor_presence: true
+    sensor_singletons:
+      log_SEABIRD_C_G: -10.354986
+      log_SEABIRD_C_H: 1.1996267
+      log_SEABIRD_C_I: -0.0023424325
+      log_SEABIRD_C_J: 0.0002635108
+      log_SEABIRD_T_G: 0.0043890956
+      log_SEABIRD_T_H: 0.00065287336
+      log_SEABIRD_T_I: 2.754709e-05
+      log_SEABIRD_T_J: 3.0424237e-06
+      sg_cal_c_g: -10.3549864
+      sg_cal_c_h: 1.19962672
+      sg_cal_c_i: -0.00234243256
+      sg_cal_c_j: 0.000263510809
+      sg_cal_t_g: 0.00438909553
+      sg_cal_t_h: 0.000652873359
+      sg_cal_t_i: 2.75470906e-05
+      sg_cal_t_j: 3.04242362e-06
+    sensor_variables:
+      eng_condFreq: DataArray(sg_data_point)
+      eng_tempFreq: DataArray(sg_data_point)
+  DISSOLVED_GAS:
+    sensor_attributes:
+      SBE43_qc: '{''flag_meanings'': ''QC_NO_CHANGE QC_GOOD QC_PROBABLY_GOOD QC_PROBABLY_BAD
+        QC_BAD QC_CHANGED QC_UNSAMPLED QC_INTERPOLATED QC_MISSING'', ''comment'':
+        ''Whether to trust the SBE43 results'', ''flag_values'': ''0 1 2 3 4 5 6 8
+        9''}'
+      sbe43: '{''long_name'': ''underway oxygen sensor'', ''ancillary_variables'':
+        ''temperature ctd_press dissolved_oxygen_sat density sg_cal_Soc sg_cal_Foffset
+        sg_cal_A sg_cal_B sg_cal_C sg_cal_E'', ''make_model'': ''unpumped Seabird
+        SBE43'', ''nodc_name'': ''oxygen sensor''}'
+      sg_cal_calibcomm_oxygen: '{}'
+    sensor_calcomm: SBE 43F s/n 005 calibration 09FEB08
+    sensor_name: DISSOLVED_GAS
+    sensor_presence: true
+    sensor_singletons:
+      sg_cal_A: -0.00066486
+      sg_cal_B: 5.6556e-05
+      sg_cal_C: -1.4701e-06
+      sg_cal_E: 0.036
+      sg_cal_Foffset: -828.0638
+      sg_cal_Pcor: 0.0
+      sg_cal_Soc: 0.00028374
+    sensor_variables:
+      eng_sbe43_O2Freq: DataArray(sg_data_point)
+      sbe43_dissolved_oxygen: DataArray(sg_data_point)
+      sbe43_dissolved_oxygen_qc: DataArray(sg_data_point)
+      sbe43_results_time: DataArray(sg_data_point)
+  FLUOROMETER:
+    sensor_attributes:
+      wlbb2f: '{''long_name'': ''underway backscatter fluorescence puck'', ''make_model'':
+        ''Wetlabs backscatter fluorescence puck''}'
+    sensor_calcomm: Unknown
+    sensor_name: FLUOROMETER
+    sensor_presence: true
+    sensor_singletons: {}
+    sensor_variables:
+      eng_wlbb2f_VFtemp: DataArray(sg_data_point)
+      eng_wlbb2f_blueCount: DataArray(sg_data_point)
+      eng_wlbb2f_blueRef: DataArray(sg_data_point)
+      eng_wlbb2f_fluorCount: DataArray(sg_data_point)
+      eng_wlbb2f_redCount: DataArray(sg_data_point)
+      eng_wlbb2f_redRef: DataArray(sg_data_point)
+  MAGNETOMETER:
+    sensor_attributes: {}
+    sensor_calcomm: Unknown
+    sensor_name: MAGNETOMETER
+    sensor_presence: false
+    sensor_singletons:
+      log_COMPASS_DEVICE: 33.0
+      log_COMPASS_USE: 0
+      magnetic_variation: -8.8
+    sensor_variables: {}
+  RAFOS:
+    sensor_attributes: {}
+    sensor_calcomm: Unknown
+    sensor_name: RAFOS
+    sensor_presence: false
+    sensor_singletons:
+      log_RAFOS_CORR_THRESH: 60.0
+      log_RAFOS_DEVICE: -1.0
+      log_RAFOS_HIT_WINDOW: 3600.0
+      log_RAFOS_PEAK_OFFSET: 1.5
+    sensor_variables: {}