MECLabTUDA

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48 repositories

kvasir-capsule-loader
Public
Inofficial dataset abstraction KvasirCapsule dataset
deep-learning datasets endoscopy capsule-endoscopy wce kvasir-capsule
Python
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MIT License
•0•1•0•0•Updated Dec 11, 2025Dec 11, 2025
NCALab
Public
Training code and pre-trained models for Neural Cellular Automata on different datasets and tasks
deep-learning classification segmentation neural-cellular-automata
Python
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MIT License
•0•1•19•0•Updated Dec 2, 2025Dec 2, 2025
LIGHTYEAR
Public
Python
•0•1•1•0•Updated Dec 2, 2025Dec 2, 2025
VoxelSceneGraph
Public
Follow me on my journey to bring Scene Graph Generation to Intracranial Hemorrhage detection and treatment.
scene-graph hemorrhage
Jupyter Notebook
•1•6•0•0•Updated Nov 3, 2025Nov 3, 2025
Lifelong-nnUNet
Public
pytorch medical-imaging image-segmentation lifelong-learning continual-learning medical-image-segmentation nnunet
Python
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Apache License 2.0
•18•155•5•2•Updated Oct 20, 2025Oct 20, 2025
FedNCA
Public
Official implementation of MICCAI 2025 paper Equitable Federated Learning with NCA
medical-imaging federated-learning medical-image-segmentation neural-cellular-automata
Jupyter Notebook
•1•2•0•0•Updated Oct 8, 2025Oct 8, 2025
SG2VID
Public
SG2VID: Scene Graphs Enable Fine-Grained Control for Video Synthesis (MICCAI 2025 - ORAL)
scene-graph diffusion-models surgical-video video-synthesis eye-surgery
Python
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Creative Commons Attribution 4.0 International
•0•4•0•0•Updated Aug 28, 2025Aug 28, 2025
SurGrID
Public
SurGrID: Controllable Surgical Simulation via Scene Graph to Image Diffusion (IPCAI 2025)
scene-graph diffusion-models surgical-simulation image-diffusion
Python
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Creative Commons Attribution 4.0 International
•0•4•0•0•Updated Aug 28, 2025Aug 28, 2025
NCA-tutorial
Public
tutorial pytorch neural-cellular-automata
Jupyter Notebook
•1•2•0•0•Updated Aug 15, 2025Aug 15, 2025
OctreeNCA
Public
medical-imaging cuda-kernels digital-pathology medical-image-segmentation neural-cellular-automata
Jupyter Notebook
•0•0•0•0•Updated Aug 13, 2025Aug 13, 2025
ASMR
Public
Official implementation of our paper ASMR: Angular Client Support for Malfunctioning Client Resilience in Federated Learning accepted at MIDL 2024
medical-imaging federated-learning medical-image-classification federated-learning-attacks
Python
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MIT License
•1•1•0•0•Updated Jul 27, 2025Jul 27, 2025
M3d-Cam
Public
Generation of 3D/ 2D attention maps for both classification and segmentation
deep-learning grad-cam pytorch guided-backpropagation attention-maps grad-cam-visualization
Python
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MIT License
•41•328•14•2•Updated Jul 17, 2025Jul 17, 2025
awesome-nca
Public
A curated list of anything related to Neural Cellular Automata (NCA) research, frameworks and applications.
deep-learning neural-networks awesome-list nca neural-cellular-automata
1•5•0•0•Updated Jul 15, 2025Jul 15, 2025
SASVi
Public
SASVi - Segment Any Surgical Video (IPCAI 2025)
image-segmentation medical-image-segmentation foundation-models sam2 surgical-imaging
Python
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Creative Commons Attribution 4.0 International
•0•9•0•0•Updated Jul 3, 2025Jul 3, 2025
QA_med_data
Public
Python
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MIT License
•1•1•0•0•Updated Jul 2, 2025Jul 2, 2025
SDS_Playground
Public
Repository for implementing various dataset classes for Surgical Data Science
Jupyter Notebook
•0•0•0•0•Updated Jun 20, 2025Jun 20, 2025
M3D-NCA
Public
Jupyter Notebook
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MIT License
•4•37•1•0•Updated Jun 20, 2025Jun 20, 2025
TheODen
Public
Open-source solution for real-world cross-silo federated learning, primary focus on medical data
medical-image-analysis federated-learning distributed-learning
Jupyter Notebook
•0•8•0•0•Updated Jun 14, 2025Jun 14, 2025
eNCApsulate
Public
Bringing Neural Cellular Automata to Capsule Endoscopes
image-segmentation depth-estimation monocular-depth-estimation capsule-endoscopy neural-cellular-automata
MIT License
•0•0•0•0•Updated Apr 25, 2025Apr 25, 2025
SAM-White
Public
Jupyter Notebook
•0•0•0•0•Updated Dec 23, 2024Dec 23, 2024
NCAdapt
Public
Official PyTorch code base for our WACV 2025 published paper NCAadapt: Dynamic adaptation with domain-specific Neural Cellular Automata for continual hippocampus segmentation.
medical-imaging continual-learning medical-image-segmentation neural-cellular-automata hippocampus-segmentation
Jupyter Notebook
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MIT License
•0•1•0•0•Updated Dec 4, 2024Dec 4, 2024
GAUDA
Public
0•0•0•0•Updated Dec 2, 2024Dec 2, 2024
MECLabTUDA.github.io
Public
JavaScript
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MIT License
•0•2•0•0•Updated Nov 15, 2024Nov 15, 2024
NCA-Morph
Public
Official PyTorch code base for our BMVC 2024 published paper NCA-Morph: Medical Image Registration with Neural Cellular Automata.
medical-image-registration neural-cellular-automata
Jupyter Notebook
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Apache License 2.0
•1•5•0•0•Updated Aug 29, 2024Aug 29, 2024
HARP
Public
Repository for Histopathological Artifact Restoration Pipeline
pytorch histopathology diffusion-models aritfact-restoration
Python
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Creative Commons Attribution 4.0 International
•0•9•1•0•Updated Jun 27, 2024Jun 27, 2024
UnCLeSAM
Public
Official PyTorch code base for our MIDL 2024 published paper UnCLeSAM: Unleashing SAM’s Potential for Continual Prostate MRI Segmentation.
continual-learning segment-anything-model
Jupyter Notebook
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Apache License 2.0
•0•3•0•0•Updated May 21, 2024May 21, 2024
SWOT
Public
0•0•0•0•Updated Mar 22, 2024Mar 22, 2024
TC-Seq2Seq
Public
Jupyter Notebook
•0•0•1•0•Updated Oct 28, 2023Oct 28, 2023
Atlas-Replay
Public
Jupyter Notebook
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Apache License 2.0
•0•10•0•0•Updated Oct 26, 2023Oct 26, 2023
ClosingTheLoop
Public
Python
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MIT License
•0•1•0•0•Updated Aug 28, 2023Aug 28, 2023