Repositories list

• 2025-December-Introduction-To-Python-For-Bioinformatics

  Public
  This workshop consists of five half-day sessions, combining lecture and exercises to teach you the basics of programming (using python), with an emphasis on bi…

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 13, 2025Dec 13, 2025

• 2025-December-Fundamentals-of-Scientific-Computing

  Public

  ucdavis-bioinformatics-training/2025-December-Fundamentals-of-Scientific-Computing’s past year of commit activity
  Master the essential tools for modern scientific computing. This intensive boot camp covers the foundational skills every researcher needs: navigating the comma…

  CSS

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

• ucdavis-bioinformatics-training_template

  Public template
  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •1•3•4•2•Updated Dec 6, 2025Dec 6, 2025

• 2025-November-Introduction-to-R-for-Bioinformatics

  Public
  An introduction to the basic R programming for biologists. No data analysis experience necessary! Participants will gain skills necessary to run basic statisti…

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Nov 8, 2025Nov 8, 2025

• 2025-September-Introduction-to-the-Command-Line-for-Bioinformatics

  Public
  An introduction to command line basics for bioinformatics. Aimed at giving biologists with little-to-no data analysis experience the tools to successfully run …

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Sep 20, 2025Sep 20, 2025

• 2025-August-Intermediate-Visualization-for-Bioinformatics

  Public
  A workshop to teach participants how to use R to visualize bioinformatics data. I.e., make pretty pictures!

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Aug 29, 2025Aug 29, 2025

• limma-proteomics-analysis-August-2025

  Public
  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Aug 28, 2025Aug 28, 2025

• limma-proteomics-August-2025

  Public
  Ruby

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Aug 27, 2025Aug 27, 2025

• visualization-test

  Public
  testing workshop repo creation

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Jul 28, 2025Jul 28, 2025

• 2025-July-Introduction-to-R-for-Bioinformatics

  Public
  An introduction to the basic R programming for biologists. No data analysis experience necessary! Participants will gain skills necessary to run basic statisti…

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Jul 19, 2025Jul 19, 2025

• 2025-July-Single-Cell-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Jul 10, 2025Jul 10, 2025

• ucdavis-bioinformatics-training.github.io

  Public
  CSS

  •0•6•0•0•Updated Jun 17, 2025Jun 17, 2025

• 2025-June-Introduction-to-the-Command-Line-for-Bioinformatics

  Public
  An introduction to command line basics for bioinformatics. Aimed at giving biologists with little-to-no data analysis experience the tools to successfully run …

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Jun 14, 2025Jun 14, 2025

• 2025-June-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •1•0•0•0•Updated Jun 5, 2025Jun 5, 2025

• 2023-June-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•2•0•0•Updated Jun 4, 2025Jun 4, 2025

• 2025-Spring-BIS180L

  Public
  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated May 29, 2025May 29, 2025

• 2025-May-Introduction-To-Python-For-Bioinformatics

  Public
  This workshop consists of five half-day sessions, combining lecture and exercises to teach you the basics of programming (using python), with an emphasis on bio…

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated May 12, 2025May 12, 2025

• 2025-April-Introduction-to-R-for-Bioinformatics

  Public
  An introduction to the basic R programming for biologists. No data analysis experience necessary! Participants will gain skills necessary to run basic statisti…

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Apr 19, 2025Apr 19, 2025

• 2025-March-Spatial-Transcriptomics

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Mar 27, 2025Mar 27, 2025

• 2021-July-Genome-Wide-Association-Studies

  Public
  Learn to execute a successful GWAS experiment from design to analysis.

  HTML

  •

  Creative Commons Zero v1.0 Universal

  •3•8•0•0•Updated Mar 17, 2025Mar 17, 2025

• 2024-December-Single-Cell-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• 2024-November-Introduction-To-Python-For-Bioinformatics

  Public
  This workshop consists of five half-day sessions, combining lecture and exercises to teach you the basics of programming (using python), with an emphasis on bi…

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Nov 23, 2024Nov 23, 2024

• 2024-October-Introduction-to-R-for-Bioinformatics

  Public
  An introduction to the basic R programming for biologists. No data analysis experience necessary! Participants will gain skills necessary to run basic statisti…

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

• 2024-September-Introduction-to-the-Command-Line-for-Bioinformatics

  Public
  An introduction to command line basics for bioinformatics. Aimed at giving biologists with little-to-no data analysis experience the tools to successfully run …

  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Sep 21, 2024Sep 21, 2024

• limma-proteomics-August-2024

  Public
  CSS

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•0•0•Updated Aug 28, 2024Aug 28, 2024

• limma-proteomics-analysis-August-2024

  Public
  0•0•0•0•Updated Aug 27, 2024Aug 27, 2024

• 2024-July-Introduction-to-R-for-Bioinformatics

  Public
  An introduction to the basic R programming for biologists. No data analysis experience necessary! Participants will gain skills necessary to run basic statisti…

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•2•0•0•Updated Jul 20, 2024Jul 20, 2024

• 2024-June-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•1•0•0•Updated Jun 28, 2024Jun 28, 2024

• 2024-June-Advanced-Topics-in-Single-Cell-RNA-Seq-Multiome

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Jun 13, 2024Jun 13, 2024

• 2024-June-Single-Cell-RNA-Seq-Analysis

  Public
  HTML

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Jun 13, 2024Jun 13, 2024