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Inquiry about sample size effects in smc++ analysis

Status: Open.

#274 In popgenmethods/smcpp;

· SunJJ230120 opened on Aug 28, 2025

Error during smc++ estimate

Status: Open.

#273 In popgenmethods/smcpp;

· g-fabbri opened on Jun 11, 2025

smc++ split

Status: Open.

#272 In popgenmethods/smcpp;

· gruit01 opened on Jun 3, 2025

Does the input file VCF need to be filtered by missing rate?

Status: Open.

#271 In popgenmethods/smcpp;

· kuangzhuoran opened on May 28, 2025

[Errorno24]: Too many open files

Status: Open.

#269 In popgenmethods/smcpp;

· schmidte10 opened on Mar 31, 2025

Question about creating a mask.bed file

Status: Open.

#268 In popgenmethods/smcpp;

· kodai-kishino opened on Feb 12, 2025

Inquiry on Using Pooled Samples for Population History Inference with SMC++

Status: Open.

#267 In popgenmethods/smcpp;

· JcWukkkk opened on Nov 19, 2024

does the input file VCF need to be filtered by linkage unbalanced LD?

Status: Open.

#266 In popgenmethods/smcpp;

· chelisa opened on Oct 31, 2024

Installation recommendations

Status: Open.

#265 In popgenmethods/smcpp;

· ericgonzalezs opened on Sep 18, 2024

vcf2smc

Status: Open.

#264 In popgenmethods/smcpp;

· Risingsun93 opened on Aug 25, 2024

Why does the SMC++ estimate produce significantly different results when I change the -d parameter?

Status: Open.

#263 In popgenmethods/smcpp;

· caocaoBioInfo opened on Aug 22, 2024

smcpp.commands.vcf2smc WARNING Multiple entries found at 13 positions; skipped all but the first

Status: Open.

#262 In popgenmethods/smcpp;

· Keerlllws opened on Jul 28, 2024