Update figure shortcodes to new syntax

.github/workflows/links.yml

@@ -40,6 +40,7 @@ jobs:
             --exclude "https://doi\.org|www.sciencedirect\.com/*"
             --exclude https://plausible.io/pybamm.org
             --exclude https://ecsarxiv.org/67ckj/
+            --exclude https://scholar.google.com/
             --exclude-path ./static/teams/contributors.html
             --exclude-path ./content/gsoc/
             --accept 200,429,999

assets/css/overrides.css

@@ -35,8 +35,12 @@ content-container class */
     text-decoration: none;
 }
 
-/* Remove breadcrumbs background from navbar */
+/* More gaps for footer columns because of external link indicators */
+.footer-column {
+    margin-right: 2em;
+}
 
-nav[aria-label="Breadcrumb"] {
-    background-color: unset;
+/* Don't set widths for 100% of the viewport for these, just the screen. */
+.news-container, .hero-container {
+    width: 100%;
 }

config.yaml

@@ -127,15 +127,18 @@ params:
         title: ""
         links:
           - text: Install PyBaMM
+            is_external: true
             link: https://docs.pybamm.org/en/stable/source/user_guide/installation/index.html
 
           - text: Getting started
             link: /learn/
 
           - text: Examples
+            is_external: true
             link: https://github.com/pybamm-team/PyBaMM/tree/develop/examples/
 
           - text: Documentation
+            is_external: true
             link: https://docs.pybamm.org/
 
           - text: Release notes
@@ -151,6 +154,7 @@ params:
             link: /contribute/
 
           - text: Ionworks
+            is_external: true
             link: https://ionworks.com/
 
           - text: News
@@ -172,4 +176,4 @@ params:
             link: /governance/
 
           - text: Roadmap
-            link: https://github.com/pybamm-team/PyBaMM/wiki/Roadmap/
+            link: /roadmap/

content/about/index.md

@@ -28,48 +28,48 @@ Ionworks provides support and custom feature development for PyBaMM, as well as
 For companies who want to leverage the power, flexibility, and openness of the Python ecosystem for their battery simulation needs, Ionworks is the go-to partner.
 [Contact Ionworks](https://ionworks.com/) to find out more.
 
-{{< figure >}}
-src = '/images/logos/ionworks-logo.png'
-alt = 'Logo for Ionworks'
-width = 500
-attributionlink = ''
-{{< /figure >}}
+{{< figure
+  src="/images/logos/ionworks-logo.png"
+  alt="Logo for Ionworks"
+  width=500
+  attributionlink=""
+>}}
 
 ### The Oxford Research Software Engineering Group
 
 [OxRSE](https://www.rse.ox.ac.uk/) is the central RSE team at the University of Oxford. They have been part of the PyBaMM core development team since its inception and provide on-going software development support,
 funded by the [Faraday Institution](https://faraday.ac.uk/). If you want to know more about OxRSE can support your research, please [get in touch](https://www.rse.ox.ac.uk/contact).
 
-{{< figure >}}
-src = '/images/logos/2024_oxrse_rectangle.svg'
-alt = 'Logo for OxRSE'
-width = 500
-attributionlink = ''
-{{< /figure >}}
+{{< figure
+  src="/images/logos/2024_oxrse_rectangle.svg"
+  alt="Logo for OxRSE"
+  width=500
+  attributionlink=""
+>}}
 
 ### The Faraday Institution
 
 The Faraday Institution supports many PyBaMM contributors, who contribute to the project as part of their official duties at universities across the UK.
 
-{{< figure >}}
-src = '/images/logos/faraday-logo.png'
-alt = 'Logo for The Faraday Institution'
-width = 500
-attributionlink = ''
-caption = "Logo for The Faraday Institution"
-{{< /figure >}}
+{{< figure
+  src="/images/logos/faraday-logo.png"
+  alt="Logo for The Faraday Institution"
+  width=500
+  attributionlink=""
+  caption="Logo for The Faraday Institution"
+>}}
 
 ### NumFOCUS
 
 PyBaMM is a Sponsored Project of NumFOCUS, a 501(c)(3) nonprofit charity in the United States. The mission of NumFOCUS is to promote open practices in research, data, and scientific computing by serving as a fiscal sponsor for open source projects and organizing community-driven educational programs.
 
-{{< figure >}}
-src = '/images/logos/NumFOCUS_sponsored_project_logo.svg'
-alt = 'NumFOCUS Logo'
-width = 500
-attributionlink = ''
-caption = "NumFOCUS Logo"
-{{< /figure >}}
+{{< figure
+  src="/images/logos/NumFOCUS_sponsored_project_logo.svg"
+  alt="NumFOCUS Logo"
+  width=500
+  attributionlink=""
+  caption="NumFOCUS Logo"
+>}}
 
 ### Google Summer of Code
 
@@ -81,61 +81,61 @@ We are grateful to the following organizations for supporting PyBaMM's developme
 
 <div style="display:flex; justify-content:space-around; align-items:center; flex-wrap:wrap">
 
-{{< figure >}}
-src = '/images/logos/university_of_oxford.svg'
-alt = 'Logo for the University of Oxford'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/university_of_michigan.svg'
-alt = 'Logo for the University of Michigan'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/carnegie_mellon_university.svg'
-alt = 'Logo for Carnegie Mellon University'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/imperial_college_london.png'
-alt = 'Logo for Imperial College London'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/university_of_warwick.png'
-alt = 'Logo for the University of Warwick'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/university_college_london.svg'
-alt = 'Logo for University College London'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/lilium.png'
-alt = 'Logo for Lilium GmbH'
-width = 500
-attributionlink = ''
-{{< /figure >}}
-
-{{< figure >}}
-src = '/images/logos/sila.png'
-alt = 'Logo for Sila Nanotechnologies'
-width = 500
-attributionlink = ''
-{{< /figure >}}
+{{< figure
+  src="/images/logos/university_of_oxford.svg"
+  alt="Logo for the University of Oxford"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/university_of_michigan.svg"
+  alt="Logo for the University of Michigan"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/carnegie_mellon_university.svg"
+  alt="Logo for Carnegie Mellon University"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/imperial_college_london.png"
+  alt="Logo for Imperial College London"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/university_of_warwick.png"
+  alt="Logo for the University of Warwick"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/university_college_london.svg"
+  alt="Logo for University College London"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/lilium.png"
+  alt="Logo for Lilium GmbH"
+  width=500
+  attributionlink=""
+>}}
+
+{{< figure
+  src="/images/logos/sila.png"
+  alt="Logo for Sila Nanotechnologies"
+  width=500
+  attributionlink=""
+>}}
 
 </div>
 

content/news/2024/05/31/pybamm-24.5.md

@@ -108,7 +108,7 @@ model = pybamm.lithium_ion.DFN(
 )
 ```
 
-Note that additional parameter values might be required for the model to run. For more details, please see the [corresponding notebook](https://docs.pybamm.org/en/latest/source/examples/notebooks/models/differential-capacity-hysteresis-state.html).
+Note that additional parameter values might be required for the model to run. For more details, please see the [corresponding notebook](https://docs.pybamm.org/en/latest/source/examples/notebooks/models/hysteresis-state-models.html).
 
 ## Lithium plating for composite electrodes
 _Implemented by [Simon O'Kane](https://github.com/DrSOKane)_

content/news/2025/04/02/pybamm-25.4.md

@@ -39,7 +39,7 @@ pybamm.lithium_ion.DFN(
 )
 ```
 
-For more information on this and the other hysteresis models available in PyBaMM, see [the hysteresis notebook](https://docs.pybamm.org/en/stable/source/examples/notebooks/models/differential-capacity-hysteresis-state.html).
+For more information on this and the other hysteresis models available in PyBaMM, see [the hysteresis notebook](https://docs.pybamm.org/en/latest/source/examples/notebooks/models/hysteresis-state-models.html).
 
 ## Experiments compatible with input parameters
 _Implemented by [Rishab Kumar Jha](https://github.com/Rishab87)_

content/publications.md

@@ -18,6 +18,7 @@ The following papers have contributed directly to the development of PyBaMM.
 
 
 {{< grid columns="1 2 2 3" >}}
+
 [[item]]
 type = 'card'
 title = 'Marquis,  S.  G., Sulzer, V.,  Timms,  R.,  Please,  C.  P.,  &  Chapman,  S.  J.  (2019).'
@@ -27,14 +28,16 @@ body = '''
 '''
 footer = '''
 <div class="custom-flex-btns">
-{{< button dark >}}
-label: Preprint
-link: https://arxiv.org/abs/1905.12553
-{{< /button >}}
-{{< button light >}}
-label: DOI
-link: https://doi.org/10.1149/2.0341915jes
-{{< /button >}}
+{{< button
+    style="dark"
+    label="Preprint"
+    link="https://arxiv.org/abs/1905.12553"
+>}}
+{{< button
+    style="light"
+    label="DOI"
+    link="https://doi.org/10.1149/2.0341915jes"
+>}}
 </div>
 '''
 
@@ -49,10 +52,11 @@ Development of Experimental Techniques for Parameterization of Multi-scale Lithi
 footer = '''
 <div class="custom-flex-btns">
 
-{{< button light >}}
-label: DOI
-link: https://doi.org/10.1149/1945-7111/ab9050
-{{< /button >}}
+{{< button
+    style="light"
+    label="DOI"
+    link="https://doi.org/10.1149/1945-7111/ab9050"
+>}}
 </div>
 '''
 
@@ -68,10 +72,11 @@ body = '''
 footer = '''
 <div class="custom-flex-btns">
 
-{{< button light >}}
-label: DOI
-link: https://doi.org/10.1149/1945-7111/aba44b
-{{< /button >}}
+{{< button
+    style="light"
+    label="DOI"
+    link="https://doi.org/10.1149/1945-7111/aba44b"
+>}}
 </div>
 '''
 
@@ -84,14 +89,18 @@ body = '''
 '''
 footer = '''
 <div class="custom-flex-btns">
-{{< button dark >}}
-label: Preprint
-link: https://arxiv.org/abs/2005.05127
-{{< /button >}}
-{{< button light >}}
-label: Code
-link: https://github.com/rtimms/asymptotic-pouch-cell
-{{< /button >}}
+{{< button
+    style="dark"
+    label="Preprint"
+    link="https://arxiv.org/abs/2005.05127"
+>}}
+
+{{< button
+    style="light"
+    label="Code"
+    link="https://github.com/rtimms/asymptotic-pouch-cell"
+>}}
+
 </div>
 '''
 
@@ -105,18 +114,21 @@ body = '''
 '''
 footer = '''
 <div class="custom-flex-btns">
-{{< button dark >}}
-label: Preprint
-link: https://arxiv.org/abs/2008.03691
-{{< /button >}}
-{{< button light >}}
-label: DOI
-link: https://doi.org/10.1149/1945-7111/abbce4
-{{< /button >}}
+{{< button
+    style="dark"
+    label="Preprint"
+    link="https://arxiv.org/abs/2008.03691"
+>}}
+
+{{< button
+    style="light"
+    label="DOI"
+    link="https://doi.org/10.1149/1945-7111/abbce4"
+>}}
 </div>
 '''
-{{< /grid >}}
 
+{{< /grid >}}
 
 
 ## Citations