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Fix embed_ref=2 on SEQ * and MD:Z tag. Windows/MinGW-W64 CI #369: Pull request #1964 opened by jkbonfield
5m 14s jkbonfield:embed-MD
jkbonfield:embed-MD
5m 14s
update for filters which refer header data Windows/MinGW-W64 CI #368: Pull request #1959 synchronize by vasudeva8
5m 30s vasudeva8:filter1
vasudeva8:filter1
5m 30s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #367: Pull request #1960 synchronize by jkbonfield
5m 51s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
5m 51s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #366: Pull request #1960 synchronize by jkbonfield
5m 38s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
5m 38s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #365: Pull request #1960 synchronize by jkbonfield
6m 3s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
6m 3s
removed direct header access through file, uses user read header Windows/MinGW-W64 CI #364: Pull request #1963 opened by vasudeva8
5m 46s vasudeva8:sample_upd
vasudeva8:sample_upd
5m 46s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #363: Pull request #1960 synchronize by jkbonfield
5m 48s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
5m 48s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #362: Pull request #1960 synchronize by jkbonfield
6m 0s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
6m 0s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #361: Pull request #1960 synchronize by jkbonfield
5m 52s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
5m 52s
Check for __builtin_cpu_supports("ssse3") in make-only builds Windows/MinGW-W64 CI #360: Commit 1e3cef4 pushed by jkbonfield
5m 25s develop
develop
5m 25s
Rewrite to avoid undefined NULL+0 pointer arithmetic (#1962) Windows/MinGW-W64 CI #359: Commit aaa4784 pushed by vasudeva8
5m 18s develop
develop
5m 18s
Minor one-line rewrite to avoid undefined behaviour Windows/MinGW-W64 CI #358: Pull request #1962 opened by jmarshall
5m 18s jmarshall:fix-null-ptr-arith
jmarshall:fix-null-ptr-arith
5m 18s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #357: Pull request #1960 synchronize by jkbonfield
6m 5s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
6m 5s
Add UMI support to FASTQ input/output. Windows/MinGW-W64 CI #356: Pull request #1960 opened by jkbonfield
5m 28s jkbonfield:UMI-import-export
jkbonfield:UMI-import-export
5m 28s
update for filters which refer header data Windows/MinGW-W64 CI #355: Pull request #1959 opened by vasudeva8
5m 29s vasudeva8:filter1
vasudeva8:filter1
5m 29s
Switch from strtol to hts_str2uint in mod parsing (#1957) Windows/MinGW-W64 CI #354: Commit 72422ef pushed by jkbonfield
6m 0s develop
develop
6m 0s
Fix compilation failure on MacOS X 10.9 (and likely other very old platforms) Windows/MinGW-W64 CI #353: Pull request #1945 synchronize by daviesrob
6m 2s daviesrob:ancient_macos
daviesrob:ancient_macos
6m 2s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #352: Pull request #1957 synchronize by cjw85
5m 37s cjw85:mod-uint-conv
cjw85:mod-uint-conv
5m 37s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #351: Pull request #1957 synchronize by cjw85
5m 13s cjw85:mod-uint-conv
cjw85:mod-uint-conv
5m 13s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #350: Pull request #1957 synchronize by cjw85
3m 17s cjw85:mod-uint-conv
cjw85:mod-uint-conv
3m 17s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #349: Pull request #1957 synchronize by cjw85
2m 40s cjw85:mod-uint-conv
cjw85:mod-uint-conv
2m 40s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #348: Pull request #1957 synchronize by cjw85
5m 41s cjw85:mod-uint-conv
cjw85:mod-uint-conv
5m 41s
S3 Code Rewrite Windows/MinGW-W64 CI #347: Pull request #1958 opened by whitwham
5m 19s whitwham:s3_read_4
whitwham:s3_read_4
5m 19s
Switch from strtol to hts_str2uint in mod parsing Windows/MinGW-W64 CI #346: Pull request #1957 opened by cjw85
5m 50s cjw85:mod-uint-conv
cjw85:mod-uint-conv
5m 50s
Add support for VCFv4.4 / VCFv4.5 Number= fields Windows/MinGW-W64 CI #345: Pull request #1874 synchronize by daviesrob
4m 37s daviesrob:new_number_types
daviesrob:new_number_types
4m 37s