SeqFu v1.6.0

• Improved STDIN messages, that can be disabled by $SEQFU_QUIET=1
• Added --format irida in seqfu metadata (for IRIDA uploader)
• Added --gc in seqfu qual: will print an additional column with the GC content
• Minor improvements on seqfu cat

SeqFu v1.5.2

• seqfu cat has new options to manipulate the sequence name (like --append STRING) and to add comments (like --add-len, --add-gc)

SeqFu v1.5.0

• seqfu count now multithreading and redesigned. The output format is identical but the order of the records is not protected (use seqfu count-legacy if needed)
• seqfu cat can print a list of sequences matching the criteria (--list)

SeqFu v1.4.0

• Added fu-shred
• Added --reverse-read to fu-nanotags

SeqFu v1.3.6

• Automatic release system
• Documentation updates
• Minor updates

v1.3.3

fix

v1.3.2 - metadata for qiime2

seqfu metadata --format qiime2 now has its own implementation (the previous releases relied on the forward compatibility of mapping files)

v1.2.3 - tabulate

• added seqfu tabulate

v1.2.1 - nanotags

BUG FIX in seqfu rc: when a single sequence sequence was provided as argument, --only-rev was working at the opposite

New tool: fu-nanotags

v1.2.0 - qualified regions

• Bug fix: SigPipe handling was not working since 1.0.0
• New: seqfu tabulate to generate metadata/mapping files from directories
• seqfu qual now automatically detects the qualified region of the reads using a sliding window.
• Minor improvements in documentation and implementation of seqfu head, seqfu cat