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Releases: telatin/seqfu2

v1.3.3

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@telatin telatin released this 17 Jun 20:24
fix

v1.3.2 - metadata for qiime2

Pre-release

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@telatin telatin released this 16 Jun 12:32

seqfu metadata --format qiime2 now has its own implementation (the previous releases relied on the forward compatibility of mapping files)

v1.2.3 - tabulate

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@telatin telatin released this 09 Jun 12:34
  • added seqfu tabulate

v1.2.1 - nanotags

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@telatin telatin released this 07 Jun 15:54

BUG FIX in seqfu rc: when a single sequence sequence was provided as argument, --only-rev was working at the opposite

New tool: fu-nanotags

v1.2.0 - qualified regions

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@telatin telatin released this 04 Jun 16:20
  • Bug fix: SigPipe handling was not working since 1.0.0
  • New: seqfu tabulate to generate metadata/mapping files from directories
  • seqfu qual now automatically detects the qualified region of the reads using a sliding window.
  • Minor improvements in documentation and implementation of seqfu head, seqfu cat

v1.1.0

v1.1.0 Pre-release
Pre-release

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@telatin telatin released this 28 May 16:51
0b7b4b7
  • Added tool to generate metadata (tabulate, now metadata from 1.2.+)
  • seqfu rc can now --only-rev and has improved stdin handling
  • Improved documentation
  • Various Bugfixes, including derep #4;

v1.0.0 seqfu cat

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@telatin telatin released this 06 May 09:50
  • seqfu cat to print multiple files

v0.9.6 Windows release

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@telatin telatin released this 20 Apr 15:56
  • Refactored signal handling to support compilation from Windows
    • In this release we attach our compiled binaries that require a DLL library (zlib1.dll). We supply three versions and one should work when placed in the same directory as the other executables. We are not able to support Windows at the moment, but we found possible to compile and use SeqFu from Windows.
  • Minor bugfix in fu-sw to handle missing files

v0.9.5 with core binaries

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@telatin telatin released this 13 Apr 13:00
  • Improved documentation thanks to reviewer's comments
  • Improved seqfu view (support for ASCII encoding of quality scores)
  • New tool fu-multirelabel
  • Minor bug fixes

seqfu is the Linux binary, while seqfu_mac targets MacOS

v0.9.1 with binaries

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@telatin telatin released this 07 Apr 10:54
  • Improved seqfu view (collapsed visualization of multiple oligos per strand)
  • Output of seqfu rc is a naked sequence when a single string is provided