Package for working with OME-Zarr and NIFTI images in a unified manner, with a focus on spatial transformations
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Dec 19, 2025 - Python
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lightsheet-microscopy
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A Python package for detecting somas in ExaSPIM image datasets. Includes tools for image preprocessing and deep learning-based classification and training.
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Nov 6, 2025 - Jupyter Notebook
A Python package for performing neuron segmentation in large-scale image datasets.
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Dec 8, 2025 - Jupyter Notebook
Tutorial on how to track cells in Fiji using Mastodon
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Dec 30, 2025 - HTML
Light-Sheet Image Analysis Workshop organized by LiSIUM in Santiago, Chile from 5–9 January 2026.
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Jan 6, 2026 - TeX
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