Skip to content

added clustering and dimensionality reduction to NAP6 menus #392

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
jo-mueller merged 5 commits into from
May 7, 2025
Merged

added clustering and dimensionality reduction to NAP6 menus #392

Changes from all commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
8c243b4
added clustering and dimensionality reduction to NAP6 menus
jo-mueller Apr 29, 2025
76605b0
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Apr 29, 2025
f2e651e
removed submenus and gave entries more meaningful names
jo-mueller Apr 29, 2025
f26a78a
moved dim. reduction to measure
jo-mueller May 7, 2025
3e6d3aa
Minor renaming pf appearance in submenu
jo-mueller May 7, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
19 changes: 9 additions & 10 deletions src/napari_clusters_plotter/napari.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -27,25 +27,24 @@ contributions:

menus:
napari/layers/visualize:
- submenu: features_submenu

features_submenu:
- command: napari-clusters-plotter.plotter

napari/layers/measure:
- command: napari-clusters-plotter.Dimensionality_Reduction

napari/layers/classify:
- command: napari-clusters-plotter.Clustering

widgets:
- command: napari-clusters-plotter.plotter
autogenerate: false
display_name: Clusters Plotter
display_name: Plot & select features
- command: napari-clusters-plotter.Dimensionality_Reduction
autogenerate: false
display_name: Dimensionality Reduction
display_name: Dimensionality reduction (features)
- command: napari-clusters-plotter.Clustering
autogenerate: false
display_name: Clustering

submenus:
- id : features_submenu
label: Features
display_name: Clustering (features)

sample_data:
- command: napari-clusters-plotter.bbbc_sample_data
Expand Down