Analyze_Calcium_Signals_In_Spines
Analyze calcium signals in dendritic spines. The images consist of time-series of calcium signals. Each image contains a selection that marks the point of stimulation. The tool finds the region to analyze close to the point of stimulation. It measures the intensity of the calcium signal in the whole region of interest and in the segmented spots.
The source code in git-hub can be found here.
To install the tool save the file analyze_calcium_signals_in_dendritic_spines.ijm into the folder macros/toolsets of your FIJI installation and restart FIJI.
Select the "analyze_calcium_signals_in_dendritic_spines" toolset from the >> button of the ImageJ launcher.
Volker Bäcker