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Update submodules of benchmark#107

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fmalatino merged 19 commits intoNOAA-GFDL:benchmarkfrom
fmalatino:update/benchmark
Mar 11, 2025
Merged

Update submodules of benchmark#107
fmalatino merged 19 commits intoNOAA-GFDL:benchmarkfrom
fmalatino:update/benchmark

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Description
This PR updates the benchmark branch to contain the latest versions of the Pace submodules

Checklist:

  • My code follows the style guidelines of this project
  • I have performed a self-review of my own code
  • I have commented my code, particularly in hard-to-understand areas
  • I have made corresponding changes to the documentation
  • My changes generate no new warnings
  • Any dependent changes have been merged and published in downstream modules
  • New check tests, if applicable, are included

oelbert and others added 17 commits April 19, 2024 09:47
* updated generate_eta_files

* remove notebook, add script

* lint

---------

Co-authored-by: mlee03 <Mikyung.Lee@lscamd50-d.gfdl.noaa.gov>
* Updates to allow use of python3.11

* Removed main_unit_tests.yml as it is covered by tests in containers

* Updated images for unit tests with openmpi and mpich
* updated generate_eta_files

* remove notebook, add script

* lint

* correct path

* update constraints

* python3 execute

* Update main_unit_tests_mpich.yaml

* Update main_unit_tests_mpich.yaml

* update input directory

* get ..s correct

* lint

---------

Co-authored-by: mlee03 <Mikyung.Lee@lscamd50-d.gfdl.noaa.gov>
…A-GFDL#89)

* test

* tet

* fix test dir

* test

* checkout pace

* rename

* test

* rm

* remove dir

* fix name

* test

* pyshield

* test

* fix trigger mistake

* test

* change lint version

* remove push

* lint

---------

Co-authored-by: mlee03 <Mikyung.Lee@lscamd50-d.gfdl.noaa.gov>
…tdated pull request template (NOAA-GFDL#86)

* Changed workflows to use python 3.11.7, added pytest-subtests to requirments_dev.txt

* Matched package dependencies between main and develop branches

* Updating constraints file

* Updating Dockerfile to use 3.11-slim-bookworm base python image
* fix trigger mistake

* fix spacking

* update yaml files

* rename lint.yaml

* remove backup yaml file

* simply pull request trigger

* beloved lint

---------

Co-authored-by: mlee03 <Mikyung.Lee@lscamd50-d.gfdl.noaa.gov>
…FDL#88)

* add build script for intel oneapi and gcc compiler separately

* update the python version and remove the link time optimization option for gcc
…FDL#99)

* Updated README to include directions for generating eta files

* Linting

* Updated baroclinic_c2.yaml to generate zarr output
…DL#101)

* Updated submodules as of 21 Jan 2025, and added baroclinic run to github workflow
* Update netcdf version

* also upgrade pip

* update ndsl
* Updated submodules to versions as of 15 Jan 2025

* Updated submodules as of 21 Jan 2025, and added baroclinic run to github workflow

* Updated submodules as of 5  09:49 March 2025
@fmalatino fmalatino requested a review from oelbert March 10, 2025 19:42
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@oelbert oelbert left a comment

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Small question about dependency changes

Comment on lines -11 to -13
module load gcc-native/12.3
module load boost/1.85.0
module load miniforge
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Are these changes correct for Gaes c5?

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Great, thanks

@fmalatino fmalatino merged commit 68c6fdd into NOAA-GFDL:benchmark Mar 11, 2025
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@fmalatino fmalatino deleted the update/benchmark branch July 22, 2025 14:33
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4 participants